The aim is to compare the performance of five Hi-C scaffolders using different reference genomes and assembly methods.
Compared five Hi-C scaffolders
Utilized multiple reference species
Evaluated under ideal and real-life conditions
Highlighted strengths and weaknesses of each scaffolder
Identified performance variations based on conditions
Resumen
We compare the performance of five Hi-C scaffolders using multiple reference species under both ideal and real-life conditions, thereby illuminating their strengths and weaknesses.
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Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies | Synapse