Institute of Health Research, Epidemiological Surveillance and Training

Recent papers from Institute of Health Research, Epidemiological Surveillance and Training

1. Genomic microdiversity of Mycobacterium africanum in SénégalPLoS neglected tropical diseases · 2026
2. High proportion of plasmid-mediated quinolone resistance genes and integrons in hospital- and community-acquired Enterobacterales in Dakar, SenegalBMC Research Notes · 2026
3. Characterising recent antimalarial resistance in West Africa: Insights from amplicon sequencing of 17,384 Plasmodium falciparum infection samplesWellcome Open Research · 2026
4. Genomic Diversity of Mycobacterium tuberculosis Complex in Tahiti, French PolynesiaAmerican Journal of Tropical Medicine and Hygiene · 2026
5. First detection of pfhrp2 and pfhrp3 gene deletions in Niger Republic: a retrospective sub-analysis of biological samplesMalaria Journal · 2026
6. A tiered molecular surveillance framework linking rapid dengue detection to genomic epidemiology in SenegalInternational Journal of Infectious Diseases · 2026
7. Predicting abnormal birth weight and identifying associated factors using machine learning in the Hararghe Health and Demographic Surveillance System, EthiopiaBMC Public Health · 2026
8. High exposure of pregnant women to SARS-CoV-2 during COVID-19 waves in SenegalBMC Pregnancy and Childbirth · 2026
9. Continental-scale genomic surveillance of Plasmodium falciparum malaria across sub-Saharan Africa with rapid nanopore sequencingNature Communications · 2026
10. Global distribution of mcr-carrying bacteria: an analysis of genomic data.2026
11. Therapeutic efficacy of artemether-lumefantrine and molecular markers of antimalarial drug resistance in Benin, 2022Malaria Journal · 2026
12. Oral and plasma microbiome in the context of acute febrile illness2026
13. Dynamics and ecology of a multistage expansion of Oropouche virus in BrazilNature Ecology & Evolution · 2026
14. Seroprevalence Screening of Chronic Aspergillus Infection in a Post‐Tuberculosis Cohort in Senegal: A Cross‐Sectional Study Comparing ELISA and Rapid Diagnostic TestsMycoses · 2026
15. Geographical distribution of Mycobacterium tuberculosis complex lineages in sub-Saharan Africa: An interactive review.International Journal of Infectious Diseases · 2026
16. School-aged children as a silent reservoir of Plasmodium falciparum: findings from a cross-sectional survey conducted in Burkina Faso in 2022Malaria Journal · 2026
17. Enhanced HBcAg Immunoassay Enables Detection of Clinically Relevant Low-Level HBV Viremia for Treatment EligibilityJournal of Clinical Virology · 2026
18. Detection of Circulating HBV QSA3/E Recombinants and HDV Genotype GT5 amongst blood donors in SenegalInternational Journal of Infectious Diseases · 2026
19. Antimicrobial resistance among clinical Enterobacterales isolated from humans in Senegal: a systematic review and meta-analysis from 1987 to 2022BMC Infectious Diseases · 2026
20. Hyperpigmentation in an Infant due to Vitamin B12 Deficiency: Case ReportJournal of Paediatrics and Child Health · 2026