Quantitative Biology Center

Recent papers from Quantitative Biology Center

1. Methylmercury production across an organic carbon gradient in Fe-rich subarctic soils2026
2. A host-directed virulence factor of Clostridium perfringens is modulated by gut commensal strainsGut Microbes · 2026
3. EHMT1/2-LIG1 axis enhances Temozolomide Sensitivity in Experimental GliomaNeuro-Oncology Advances · 2026
4. Oxidation of Fe(II) by nitrate-reducing Fe(II)-oxidizers enriched from Fe(III)-rich microbial mats of an extreme acidic river (Río Tinto, Spain)Applied and Environmental Microbiology · 2026
5. Thiamine cross-feeding drives microbial coexistence in the leaf microbiomeNature Microbiology · 2026
6. Cellular and Extracellular MicroRNA Dysregulation in LRRK2-Linked Parkinson’s DiseaseMolecular Neurobiology · 2025
7. Interpregnancy Interval as a Determinant of Outcome in Women with Prophylactic Cerclage Following Preterm Birth or Late MiscarriageGeburtshilfe und Frauenheilkunde · 2025
8. Cellular and Extracellular microRNA Dysregulation in LRRK2-Linked Parkinson’s Disease2025
9. Suppression of Methanogenesis by Microbial Reduction of Iron‐Organic Carbon Associations in Fully Thawed Permafrost SoilJournal of Geophysical Research Biogeosciences · 2025
10. TIMS²Rescore: A Data Dependent Acquisition-Parallel Accumulation and Serial Fragmentation-Optimized Data-Driven Rescoring Pipeline Based on MS²RescoreJournal of Proteome Research · 2025
11. Spatial organization of supercoil dynamics during DNA replication2024
12. Validation of HLA presented tumor-exclusive peptides in an independent cohort of head and neck squamous cell carcinoma.Journal of Clinical Oncology · 2024
13. Genetic redundancy in the naphthalene-degradation pathway of Cycloclasticus pugetii strain PS-1 enables response to varying substrate concentrationsFEMS Microbiology Ecology · 2024
14. Simultaneously decreasing arsenic and cadmium in rice by soil sulfate and limestone amendment under intermittent floodingEnvironmental Pollution · 2024
15. Microbial iron(III) reduction of iron-organic carbon phases across a permafrost thaw gradient and its impact on methane emissions2024
16. How tool combinations in different pipeline versions affect the outcome in RNA-seq analysisNAR Genomics and Bioinformatics · 2024
17. Perspectives on computational modeling of biological systems and the significance of the SysMod communityBioinformatics Advances · 2024
18. How tool combinations in different pipeline versions affect the outcome in RNA-seq analysis2023
19. New insights into the role of Cutibacterium acnes-derived extracellular vesicles in inflammatory skin disordersScientific Reports · 2023
20. Rhamnolipid Biosurfactants Enhance Microbial Oil Biodegradation in Surface Seawater from the North SeaACS ES&T Water · 2023