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September 5, 2025Virus ResearchOpen Access

Mutation profiling, evolution analysis, molecular dynamics simulation, and functional characterization of Omicron sub-strains

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Authors

TGTian GongXZXuan ZhangHLHaiyan Lin

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Overview

This analysis reveals mutation patterns and their effects on receptor binding affinity in Omicron variants, suggesting implications for immune response.

Key Points

  • The binding affinity of SARS-CoV-2 variants increased, particularly in B.1.1.529 and BA.2.86, due to accumulated mutations.
  • Twelve positive selection mutation sites were identified in the S protein, mostly within the N-terminal domain and receptor binding domain.
  • Molecular dynamics simulation evaluated how mutations affect immune escape from monoclonal antibodies in Omicron sub-variants.
  • Findings indicate that specific mutations may enhance receptor binding, thus contributing to the evolution and infectivity of these variants.

Cite This Study

Gong et al. (2025) studied this question.

synapsesocial.com/papers/68bb49c46d6d5674bccff88chttps://doi.org/10.1016/j.virusres.2025.199626
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