Silica-based membrane method successfully extracts high quality dsDNA from bacteriophages, indicating its effectiveness. Yield concentrations range from 2 to 100 ng/uL in 40 uL.
High molecular weight DNA can be efficiently extracted from dsDNA bacteriophages (phage) using a silica-based membrane method, such as the QIAGEN DNeasy Blood & Tissue Kit, with some modifications to significantly reduce the impact from host cell DNA contamination. Users can expect phage DNA concentrations of 2 to 100 ng/uL in 40 uL of elution buffer (median of approximately 15 ng/uL) if extracted from 450 uL of phage lysate containing > 1 x 109 PFU/mL. The concentration and yield of phage DNA is appropriate for long read whole genome sequencing, such as Oxford Nanopore Technology.
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Hedges et al. (2025) studied this question.
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