Computational analysis reveals differences in electron transfer in OmcZ and OmcS nanowires, suggesting new insights on transport mechanisms.
Electron transfer in cytochrome OmcZ and OmcS "nanowires" is explored computationally by integrating the quantum-mechanical stochastic Liouville equation with fluctuating energies and interaction matrix elements obtained from molecular-dynamics simulations and including a detailed treatment of vibronic coupling. Electron density oscillates between adjacent hemes very rapidly relative to thermal equilibration. These oscillations last for about 1.5 ns, which is long enough for a coherent wave of electron density to travel ∼60 Å, more than the length of the proteins' subunits. The calculated rates of electron flow underestimate the measured rates but reproduce the finding that long-range diffusion of electrons is significantly faster in OmcZ than in OmcS.
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Parson et al. (2025) studied this question.
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