TMT mass spectrometric identification of LOXL2-dependent deacetylation sites. Soft MoMo (motif-x algorithm) was used to analysis the model of sequences constituted with amino acids in specific positions of modify-21-mers (10 amino acids upstream and downstream of the site) in all protein sequences. And all the database protein sequences were used as background database parameter. Minimum number of occurrences was set to 20. Emulate original motif-x was ticked, and other parameters with default. In the enrichment heatmap, red means amino acid is positively enriched, green means amino acid is negatively enriched.
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Wu et al. (2024) studied this question.
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