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October 15, 2025Proceedings of the National Academy of Sciences4 citationsOpen Access

Apusomonad rhodopsins: A new family of ultraviolet to blue light–absorbing rhodopsin channels

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LGLuis Javier GalindoSTShunki TakaramotoTNTakashi Nagata

Key Points

  • Apusomonad rhodopsins respond to blue light and are crucial for negative phototaxis in apusomonads.
  • Electrophysiological measurements indicate that ApuRs function as anion-selective rhodopsin channels.
  • The study discovered that retinal photoisomerization activates these rhodopsin channels, influencing their kinetics.
  • These findings highlight the unique evolutionary path of ApuRs compared to other known rhodopsin channels.

Abstract

Apusomonads are sediment-dwelling bacterivorous protists that are sister to all Opisthokonta. They have been found to show a negative phototactic response to blue light, mediated by an as-yet unidentified photoreceptive system. Here, by screening available apusomonad omics data we found genes of a distinct group of microbial rhodopsins, apusomonad rhodopsins (ApuRs). ApuRs, heterologously expressed in mammalian cells, absorbed near-UV or violet light, suggesting that ApuRs could be involved in apusomonads’ photoavoidance response toward short-wavelength light. Electrophysiological measurements indicate that ApuRs are anion-selective rhodopsin channels which evolved independently of the family of channelrhodopsins widespread in other unicellular eukaryotes. In ApuRs, channel opening is triggered by photoisomerization of the retinal from its all- trans form to 13- cis and 11- cis forms. We found that intracellular proton transfer is involved in channel opening and determines the channel’s open/close kinetics. These findings expand our understanding of the photobiology of heterotrophic flagellates and demonstrate that UV-absorbing ApuRs are in fact the most blue-shifted rhodopsin channels known to date.

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Cite This Study

Galindo et al. (2025) studied this question.

synapsesocial.com/papers/68eff7392ae617e5891a94f3https://doi.org/10.1073/pnas.2510619122
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