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November 30, 2025Scientific Reports9 citationsOpen Access

Demonstrating soft X-ray tomography in the lab for correlative cryogenic biological imaging using X-rays and light microscopy

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Key Points

  • High-resolution imaging achieved with three-dimensional imaging of biological samples—resolution at 54 nm was possible.
  • Mammalian cells and yeast were effectively examined, revealing their internal structures and interactions within half an hour to two hours.
  • Our approach used compact soft X-ray tomography systems for imaging diverse cell types, bypassing traditional staining methods.
  • The findings highlight the need for further research into broadening the availability of correlative imaging techniques for complex specimens.

Abstract

Abstract Soft X-ray tomography (SXT) enables native-contrast three-dimensional (3D) imaging of fully hydrated, cryogenically preserved biological samples, revealing ultrastructural details without the need for staining, embedding, or sectioning. Traditionally available only at synchrotron facilities, recent advances in laser-driven plasma sources have led to the development of compact soft X-ray microscopes. Achieving a resolution of 54 nm full-pitch and tomogram acquisition times of 30 min to two hours, we validate the system across a range of biologically relevant contexts, including protists, yeast, and mammalian cells containing polymeric and inorganic nanoparticles. These use cases establish the robustness of the laboratory based system for studying cell architecture, organelle interactions, and nanoparticle trafficking. By showing that a compact SXT system can achieve reliable high-resolution imaging across various cell types, this study highlights a major step toward making correlative cryogenic X-ray imaging broadly accessible in laboratory settings. Future developments will aim at enhanced throughput, deeper integration with correlative imaging modalities, and extension to more complex specimen types, including tissue.

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Cite This Study

A 2025 study studied this question.

synapsesocial.com/papers/692b9da01d383f2b2a37a27dhttps://doi.org/10.1038/s41598-025-29385-5
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