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December 8, 2025Blood

Single-cell multi-omics uncovers differentiation-dependent transcriptional programs shaping epigenetic subgroups in AML

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Authors

MLMarkus Liew-LittorinBPBénédicte PiaugerMJMartin Jädersten

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Overview

Single-cell analysis identifies unique transcriptional regulation in leukemic stem cells, suggesting new therapeutic strategies for AML.

Key Points

  • This research aims to explore the transcriptional regulation and differentiation trajectories in acute myeloid leukemia (AML) using single-cell multi-omics.
  • Performed multi-platform single-cell RNA and ATAC-seq on 36 AML samples and 4 remission samples
  • Analyzed epigenetic heterogeneity and identified distinct differentiation states within AML subgroups
  • Used computational tools for cell clustering and transcription factor activity analysis with SCENIC+
  • Identified distinct transcriptional programs associated with leukemic stem cells across AML subgroups
  • Revealed subgroup-specific differentiation trajectories and transcription factor activation patterns
  • Demonstrated a conserved leukemic hierarchy with stem-like cells at the apex, impacting AML pathogenesis

Cite This Study

Liew-Littorin et al. (2025) studied this question.

synapsesocial.com/papers/693624d74fa91c937236d0e1https://doi.org/10.1182/blood-2025-5005
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