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January 14, 2026Archives of Microbiology7 citations

Food-borne bacterial pathogens: emerging approaches in detection and prevention

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ZSZaryab ShafiMSMohammad ShahidRSR. K. Singh

Key Points

  • Investigate emerging strategies for detecting and preventing food-borne bacterial pathogens.
  • Review of conventional and emerging detection methods
  • Analysis of preventive innovations
  • Evaluation of bioinformatic tools for risk assessment
  • Identified rapid molecular assays improve pathogen detection accuracy
  • Highlighted innovative alternatives to chemical preservatives
  • Discussed challenges in integrating multi-omics approaches into food safety monitoring

Abstract

Food-borne bacterial pathogens remain a major public health concern, causing extensive illness and economic losses worldwide. Conventional detection methods are often slow and insufficient for identifying viable but non-culturable pathogens. Recent microbiological, biotechnological and bioinformatic advances have markedly improved food safety monitoring. Rapid molecular assays (PCR, qPCR, microarrays), next-generation sequencing, metagenomics, and emerging CRISPR-based diagnostics enable faster and more accurate pathogen detection and outbreak tracing. Bioinformatic tools—including genomic databases, phylogenetics, and machine-learning models—support predictive risk assessment and real-time surveillance. Preventive innovations such as bacteriophages, probiotics, antimicrobial peptides, nanotechnology-based interventions, and engineered microbes provide sustainable alternatives to chemical preservatives. Key challenges include variability across food matrices, biosafety considerations, and limited integration of multi-omics approaches into routine workflows. Overall, these emerging strategies offer improved precision and responsiveness for detecting and preventing food-borne bacterial pathogens.

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Cite This Study

Shafi et al. (2026) studied this question.

synapsesocial.com/papers/6966f5183603a7c209c0e1cehttps://doi.org/10.1007/s00203-025-04675-8
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