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January 18, 2026Tropical Medicine and Health0 citationsOpen Access

Mycobacterium mageritense-associated refractory cutaneous infection and lymphadenitis in an immunocompetent adult: insights from genomic sequencing

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SFShinnosuke FukushimaJUJumpei UchiyamaYKYoshio Kawakami

Key Points

  • This research aims to highlight the clinical characteristics and genomic features of Mycobacterium mageritense infections.
  • Case presentation of a 48-year-old man with cutaneous lesions and lymphadenitis.
  • Wound cultures were conducted with identification confirmed by whole-genome sequencing.
  • Antimicrobial susceptibility testing was performed on the isolated bacterium.
  • M. mageritense was identified as the causative agent of the cutaneous infection.
  • Treatment with levofloxacin and minocycline resulted in complete clinical resolution after 4 months.
  • Genomic analysis identified resistance-related genes linked to variable susceptibility profiles.

Abstract

Abstract Background Nontuberculous mycobacteria are increasingly recognized as causes of chronic and refractory skin and soft tissue infections, even in individuals without immunodeficiency. Among them, Mycobacterium mageritense is a rare, rapidly growing species that can lead to persistent lesions requiring prolonged antimicrobial therapy. Reports of M. mageritense infections involving both the skin and regional lymph nodes are limited, and this case adds new clinical and genomic insights. Case presentation A 48-year-old previously healthy man presented with a slowly enlarging cutaneous lesion on his lower leg and ipsilateral inguinal lymphadenitis. Empirical antibacterial therapy with β-lactams and macrolides was ineffective. Wound cultures subsequently grew M. mageritense , confirmed by whole-genome sequencing. Several antimicrobial regimens were attempted, and the final successful therapy consisted of oral levofloxacin and minocycline for 4 months, leading to complete clinical resolution. Genomic analysis identified resistance-related genes, including erm(40) , aac(2′)-Ib , tet(V) , and RbpA , although in vitro minimum inhibitory concentrations showed variable susceptibility. Phylogenetic comparison revealed that the isolate was closely related to previously reported M. mageritense strains from Japan. Conclusions This case demonstrates that M. mageritense can cause cutaneous infection with secondary lymphadenitis in an immunocompetent host. Accurate species identification using molecular or genomic methods and selection of appropriate combination antibiotic therapy based on susceptibility testing are crucial for successful management of such infections.

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Cite This Study

Fukushima et al. (2026) studied this question.

synapsesocial.com/papers/696c79cde45ebfc9113cd540https://doi.org/10.1186/s41182-026-00904-y
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