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January 22, 2026International Journal of Molecular SciencesOpen Access

Mutation-Induced Resistance of SARS-CoV-2 Mpro to WU-04 Revealed by Multi-Scale Modeling

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Authors

MLMW LiuDZderui zhaoHDHui Duan

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Overview

Reveals changes in binding affinity and structural dynamics in SARS-CoV-2, suggesting ways to create more effective inhibitors.

Key Points

  • The aim is to understand how mutations affect the effectiveness of the SARS-CoV-2 Mpro inhibitor WU-04.
  • Conducted multi-scale molecular dynamics simulations over microsecond scales.
  • Evaluated binding affinities of wild type and various mutant proteases.
  • Applied network-rewiring inference to analyze communication pathways in the protease.
  • Single mutations reduced binding affinity by up to ~12 kcal/mol.
  • The double mutant M49K/S301P restored engagement with WU-04.
  • Network analysis showed that residue 301 affects communication between protein domains.

Cite This Study

Liu et al. (2026) studied this question.

synapsesocial.com/papers/6971be50642b1836717e300chttps://doi.org/10.3390/ijms27021000
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