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February 2, 2026Journal of Chemistry2 citationsOpen Access

Discovery of Triacylglycerol‐Binding Proteins in Cereus jamacaru DC. Through Integrative In Silico Methods

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MCM. I. O. CardosoUniversidade Federal do ABCJOJ. OliveiraUniversidade Federal do ABCVBV. BassanezeUniversidade Federal do ABC

Key Points

  • The aim is to explore the binding potential of proteins in Cereus jamacaru to triacylglycerol molecules using computational methods.
  • Performed transcriptomic analysis to identify transcripts and homologous proteins.
  • Used molecular docking to assess binding affinities of proteins to triacylglycerols.
  • Conducted molecular dynamics simulations to analyze protein stability and ligand interactions.
  • Identified 14,739 homologous proteins with varying binding affinities.
  • Banyan Peroxidase showed strong binding to triacylglycerols, especially palmitic acid (−7.63 kcal/mol).
  • Xyloglucan Endotransglycosylase exhibited specific binding to myristic acid (−7.75 kcal/mol).
  • Simulation results indicated the structural stability of Nonspecific Lipid Transfer Protein.

Abstract

The Caatinga biome in Brazil harbors unique bioactive plants, such as Cereus jamacaru DC. Historically, it has been used in traditional medicine for treating kidney issues, diabetes, and cardiovascular conditions; however, these ethnobotanical reports do not constitute evidence of clinical efficacy. Here, we integrate transcriptomics, molecular docking, and molecular dynamics approaches to explore the potential of the predicted proteome of C. jamacaru to bind to triacylglycerol molecules, particularly targeting triacylglycerol formed by lauric, myristic, and palmitic acids. Transcriptome analysis identified 128,942 transcripts, with 14,739 homologous proteins screened for binding affinities. Molecular docking highlighted an isoform of Banyan Peroxidase as a versatile candidate, exhibiting strong binding energies across all triacylglycerols, particularly palmitic acid (−7.63 kcal/mol). Xyloglucan Endotransglycosylase demonstrated specificity for myristic acid (−7.75 kcal/mol), while Nonspecific Lipid Transfer Protein showed exceptional structural stability in dynamic simulations. The molecular dynamics simulations revealed key insights into protein stability and ligand interactions. Banyan Peroxidase displayed moderate flexibility, enhancing its adaptability to diverse triacylglycerol substrates. Conversely, Xyloglucan Endotransglycosylase exhibited compact stability, making it a strong candidate for future bioengineering efforts. These findings provide a computational starting point for future experimental validation of lipid‐binding plant proteins as candidates for biotechnological applications. While promising, these results are preliminary and do not imply direct therapeutic relevance.

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Cite This Study

Cardoso et al. (2026) studied this question.

synapsesocial.com/papers/6980fe27c1c9540dea80fecfhttps://doi.org/10.1155/joch/5448761
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