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February 2, 2026Journal of the American Chemical Society3 citationsOpen Access

Introducing Small Rings into Farnesyl Pyrophosphates Paves the Way for the Enzymatic Generation of Unnatural Sesquiterpene Scaffolds

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DTDaghan TaserCVCatherine VictoriaLGLeon H. von Garrel

Key Points

  • The study investigates how small strained rings can modify farnesyl pyrophosphate to produce novel sesquiterpene skeletons.
  • Exchanging geminal dimethyl groups in farnesyl pyrophosphate with cyclopropane, cyclobutane, and oxetane
  • Exposure of new farnesyl pyrophosphate derivatives to substrate-promiscuous sesquiterpene synthases
  • Molecular modeling to predict enzyme-substrate interactions and catalytic orientation
  • Seventeen new terpenoids were identified; eleven have previously unknown terpene backbones.
  • Nucleophilic involvement of the oxygen atom in oxetane during cyclization was noted.
  • Alternative binding poses led to the formation of new molecular frameworks in sesquiterpenes.

Abstract

New sesquiterpene skeletons are accessible when the geminal dimethyl group in farnesyl pyrophosphate (FPP) is exchanged by small strained rings, specifically cyclopropane, cyclobutane, and oxetane. When these new FPP derivatives are exposed to sesquiterpene synthases, the additional chemical reactivity installed in the strained rings can interact in a unique way with the carbocation intermediates in the active centers of sesquiterpene synthases BcBOT2, PenA, Omp7, and Cop4, which are known to be substrate promiscuous. As such, they can induce rearrangements and ring enlargements, which can yield completely new, previously unknown sesquiterpene carbon skeletons with additional carbon atoms embedded in the (oligo)cyclic backbones. A total of 17 new terpenoids are reported and structurally elucidated, 11 of which have so far unknown unnatural terpene backbones. Besides rearrangements of the small rings, we report on the nucleophilic involvement of the oxygen atom in the oxetane ring during the initial cyclization step. As an additional finding, the oxetane analogues of the two known sesquiterpenes africanene and pentalenene were isolated. Molecular modeling studies revealed that the FPP derivatives are optimally oriented for catalysis within the enzymes' active sites. The simulations unveiled alternative binding poses that facilitate divergent cyclization cascades, ultimately leading to the formation of previously uncharacterized molecular frameworks of sesquiterpenes.

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Cite This Study

Taser et al. (2026) studied this question.

synapsesocial.com/papers/6980fe57c1c9540dea810546https://doi.org/10.1021/jacs.5c19651
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