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February 8, 2026Journal of Agricultural and Food Chemistry3 citations

De Novo Biosynthesis of Biochanin A in Saccharomyces cerevisiae via Integrated Metabolic and Organelle Engineering

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XTXinjia TanFHFanglin HuSZShasha Zuo

Key Points

  • The goal is to develop a system for high-level production of biochanin A using engineered Saccharomyces cerevisiae.
  • Constructed a genistein platform strain by optimizing the PlIFS gene copy number.
  • Identified PlOMT9 from Pueraria lobata as the optimal methyltransferase.
  • Expressed Vitreoscilla hemoglobin to improve cellular energy supply.
  • Expanded endoplasmic reticulum capacity and coexpressed chaperones for enzyme functionality.
  • Improved heme supply to enhance overall titer.
  • Achieved a biochanin A titer of 49.86 mg/L.
  • Initial titer of 16.10 mg/L improved significantly through various engineering strategies.
  • Increased functional expression of enzymes led to drastic titer enhancements.

Abstract

Biochanin A, a valuable O-methylated isoflavone, requires efficient P450 activity, regioselective methylation, and substantial cofactor availability. Here, we established a systematic strategy for its high-level production in Saccharomyces cerevisiae. We first constructed a genistein platform strain (16.10 mg/L) by optimizing the 2-hydroxyisoflavanone synthase gene (PlIFS) copy number. Next, a screen identified Pueraria lobata PlOMT9 as the optimal 4'-O-methyltransferase, yielding 14.29 mg/L biochanin A. As methylation was constrained by ATP supply, we augmented the cellular energy budget by expressing Vitreoscilla hemoglobin, increasing biochanin A titer to 19.48 mg/L. We then expanded the endoplasmic reticulum membrane capacity and coexpressed protein-folding chaperones, which profoundly enhanced the functional expression of the membrane-associated enzymes, skyrocketing the biochanin A titer to 39.89 mg/L. Finally, we increased the titer to 49.86 mg/L by improving the heme supply. The final strain in this study will facilitate the production of O-methylated isoflavones through the biochanin A biosynthetic pathway.

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Cite This Study

Tan et al. (2026) studied this question.

synapsesocial.com/papers/698829410fc35cd7a88496bdhttps://doi.org/10.1021/acs.jafc.5c12010
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