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February 11, 2026Genes & Development0 citationsOpen Access

The conserved N-terminal SANT1-binding domain (SBD) of EZH2 regulates PRC2 activity

APAgata L. PatriotisAllen InstituteDBD. BarrowsRockefeller UniversityYSYadira Soto-FelicianoMassachusetts Institute of Technology

Key Points

  • The study aims to explore how the SANT1-binding domain (SBD) of EZH2 influences PRC2 activity and regulation.
  • Investigated functional significance of the SANT1-binding domain in PRC2 activation.
  • Assessed genome-wide histone H3K27 methylation levels.
  • Analyzed effects of SBD deletion on EZH2 GOF mutant lymphomas.
  • Performed studies on proliferation rates of EZH2-addicted lymphoma cells.
  • The SBD is essential for genome-wide H3K27 methylation despite being dispensable for PRC2 assembly.
  • Deletion of the SBD in the presence of EZH2 GOF mutations inhibits cancer cell growth.
  • Findings indicate extensive conformational changes in the SBD during PRC2 activation.

Abstract

Polycomb group proteins maintain gene expression patterns established during early development, with Polycomb repressive complex 2 (PRC2) methyltransferase being a key regulator of cell differentiation, identity, and plasticity. Consequently, extensive somatic mutations in PRC2, including gain or loss of function (GOF or LOF), are observed in human cancers. The regulation of chromatin structure by PRC2 is critically dependent on its enhancer of zeste homolog 2 (EZH2) subunit, which catalyzes the methylation of histone H3 lysine 27 (H3K27). Recent structural studies of PRC2 revealed extensive conformational changes in the noncatalytic EZH2 N-terminal SANT1-binding domain (SBD) during PRC2 activation, though the functional significance remains unclear. Here, we investigated how the SBD regulates PRC2 function. The domain is highly conserved in metazoans and dispensable for PRC2 assembly and chromatin localization yet is required for genome-wide histone H3K27 methylation. Furthermore, we show that an intact SBD is necessary for the proliferation of EZH2-addicted lymphomas, and its deletion in the presence of EZH2 GOF mutations inhibits cancer cell growth. These observations provide new insights into the regulation of PRC2 activity in normal development and malignancy.

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Cite This Study

Patriotis et al. (2026) studied this question.

synapsesocial.com/papers/698c1cb3267fb587c655f4d4https://doi.org/10.1101/gad.353070.125
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