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February 19, 2026Brain and Behavior1 citationsOpen Access

Identification and Verification of Anoikis‐related Genes in Epilepsy Through Bioinformatics Analysis

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HZHaoxuan ZengUniversity of MichiganYYYanling YuanGuangdong Medical CollegeTTTian TanTCM-Intigrated Cancer Center of Southern Medical University

Key Points

  • The research aims to identify anoikis-related genes in epilepsy to enhance understanding and treatment options.
  • Selected transcriptomic datasets from the GEO database.
  • Identified differentially expressed genes (DEGs) and anoikis-related genes (ARGs).
  • Employed machine learning for gene selection and validation.
  • Validated findings in an epileptic mouse model.
  • Identified 3525 DEGs and isolated 24 ARGs.
  • Screened five key differentially expressed ARGs as potential biomarkers: ANKRD13C, PIK3R1, BSG, CEACAM6, and BRMS1.
  • Developed a risk score model demonstrating high diagnostic efficiency.
  • Suggested MPEP, LY-341495, and MDL-28170 as potential therapeutic agents based on connectivity map analysis.

Abstract

ABSTRACT Introduction Epilepsy is a significant neurological disorder characterized by a complex etiology. Understanding the molecular mechanisms, notably those implicated in the immune system and anoikis, is crucial for developing targeted therapies against epilepsy. Methods First, two epilepsy‐related transcriptomic datasets (GSE143272 and GSE4290) were selected from the GEO database; then, the differentially expressed genes (DEGs) were identified. Focusing on anoikis in epilepsy, we screened out anoikis‐related genes (ARGs). Bioinformatics analysis and machine learning were employed for comprehensive analysis, and the research results were validated in an epileptic mouse model. Results A total of 3525 DEGs from the GSE143272 and GSE4290 datasets were identified, and a total of 24 ARGs were obtained. The five key differentially expressed ARGs (DE‐ARGs) were screened through machine learning analysis, including ANKRD13C, PIK3R1, BSG, CEACAM6, and BRMS1; these DE‐ARGs emerged as potential biomarkers for epilepsy and were involved in various signaling pathways and immune cell activities, and results were further experimentally validated. Besides, the risk score model based on the DE‐ARGs demonstrated high diagnostic efficiency; moreover, connectivity map database analysis suggested MPEP, LY‐341495, and MDL‐28170 as potential therapeutic agents. Conclusions This study identified the five ARGs as potential therapeutic targets, highlighting the role of anoikis in epilepsy pathogenesis. Our result provides a novel insight into the molecular landscape of epilepsy and paves the way for further exploration and the development of more effective treatment strategies.

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Cite This Study

Zeng et al. (2026) studied this question.

synapsesocial.com/papers/6996a84cecb39a600b3eed8ehttps://doi.org/10.1002/brb3.71273
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