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February 21, 2026Scientific Reports0 citationsOpen Access

Predicting cardiopulmonary exercise testing outcomes in congenital heart disease through multimodal data integration and geometric learning

MAMuhammet Fatih AlkanGVGruschen VeldtmanFDFani Deligianni

Key Result

Multimodal machine learning integrating ECG signals and clinical letters improved peak oxygen consumption prediction accuracy to 70.8% compared to 61.4% with ECG alone in congenital heart disease.

Key Points

  • The aim is to predict cardiopulmonary exercise testing outcomes in patients with congenital heart disease by integrating various data sources.
  • Utilized CPET variables as surrogate mortality endpoints for congenital heart disease.
  • Applied natural language processing to extract and structure patient information from clinical letters.
  • Developed predictive models using Riemannian geometric properties of ECG and clinical data.
  • The integration of ECG data with clinical documentation resulted in significantly improved predictive performance.
  • Covariance augmentation techniques enhanced regression and classification models effectively.

Study Design

Type

Observational (n=436)

Multicenter

No

Structured PICO

Does a machine learning model integrating ECGs and clinical text data improve the prediction of CPET outcomes in patients with congenital heart disease?

P
Population
436 patients (194 female) with congenital heart disease (CHD), mean age 33 years, under regular follow-up at a single center. Primary conditions: tetralogy of Fallot (39.9%), atrial septal defect (17.6%), pulmonary atresia (16.7%), single ventricle physiology with Fontan surgery (15.1%), and Mustard procedure (10.7%). Excluded: ECGs showing atrial flutter, atrial fibrillation, or atrioventricular paced rhythms.
I
Intervention
Machine learning model integrating 12-lead ECG covariance matrices in Riemannian space with NLP-extracted clinical text data, enhanced by covariance mixing regularisation.
C
Comparator
Conventional logistic regression models using standard ECG measurements (PR intervals, QRS durations, ventricular rates) and models using only ECG data without clinical text integration.
O
Outcome
Prediction of cardiopulmonary exercise testing (CPET) variables (VO2 and VE/VCO2) as surrogate mortality endpoints.surrogate

Integrating 12-lead ECG signals with NLP-extracted clinical text data using Riemannian geometry significantly improves the prediction of prognostic CPET variables in patients with congenital heart disease.

Main Result

Absolute Event Rate: 70.8% vs 61.4%

Limitations

  • Limited discriminative ability of the classification model with AUC values ranging from 0.54 to 0.66.
  • Exclusion of patients with atrial flutter, atrial fibrillation, or paced rhythms limits applicability to only those in sinus rhythm.
  • Selection bias due to developing the CPET prediction models on a subset of 258 patients who underwent testing, limiting generalizability.
  • Small and imbalanced dataset
  • Available CPET documents were restricted to a subset of 258 patients out of the 436 patient cohort

Abstract

Abstract Cardiopulmonary exercise testing (CPET) provides a comprehensive assessment of functional capacity by measuring key physiological variables including oxygen consumption (VO₂), carbon dioxide production (VCO₂), and pulmonary ventilation (VE) during exercise. Previous research has identified peak VO₂ and VE/VCO₂ ratio as robust predictors of mortality risk in chronic heart failure (CHF) patients as well as in congenital heart disease (CHD). This study utilises CPET variables as surrogate mortality endpoints for patients with CHD. To our knowledge, this represents the first successful implementation of an advanced machine learning approach that predicts CPET outcomes by integrating electrocardiograms (ECGs) with information derived from clinical letters. Our methodology began with extracting unstructured patient information from clinical letters using natural language processing techniques, organising this data into a structured database. We then digitised ECGs to obtain quantifiable waveforms and established comprehensive data linkages. The core innovation of our approach lies in exploiting the Riemannian geometric properties of covariance matrices derived from both 12-lead ECGs and clinical text data to develop robust regression and classification models. Through extensive ablation studies, we demonstrated that the integration of ECG signals with clinical documentation, enhanced by covariance augmentation techniques in Riemannian space, consistently produced superior predictive performance compared to conventional approaches.

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Cite This Study

Alkan et al. (2026) conducted an observational in Congenital heart disease (n=436). Multimodal machine learning integration of ECGs and clinical letters using Riemannian geometry vs. ECG data alone or conventional ECG features was evaluated on Prediction of peak oxygen consumption (VO2 peak) accuracy. Multimodal machine learning integrating ECG signals and clinical letters improved peak oxygen consumption prediction accuracy to 70.8% compared to 61.4% with ECG alone in congenital heart disease.

synapsesocial.com/papers/69994cdf873532290d021cb4https://doi.org/10.1038/s41598-026-38687-1
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