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March 5, 2026European Journal of Medical Genetics0 citationsOpen Access

SPIN4-related X-linked overgrowth in a family

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LPLisanna PõlluaasTartu University HospitalSLStella LillesTartu University HospitalAPAleksandr PeetTartu University Hospital

Key Points

  • To investigate the implications of a SPIN4 loss-of-function variant causing overgrowth syndrome in a family.
  • Exome sequencing conducted on the index case and family members.
  • Examined growth-related findings and clinical features in family members.
  • Compared clinical outcomes with previously reported cases.
  • The index case exhibited tall stature and other growth-related findings.
  • Loss-of-function variant identified in SPIN4 was confirmed in the proband's mother and grandmother.
  • Both affected family members displayed skewed X-deviation without significant height gain.

Abstract

Spindlin Family Member 4 (SPIN4) is an epigenetic reader gene on the X chromosome. Its loss-of-function variant altering the WNT/β-catenin pathway was recently reported to cause a SPIN4 -associated overgrowth syndrome in an extended family. The index case is a 14-year-old male with tall stature (+2. 0 SD) as the only growth-related finding, accompanied by protruding joints, splenomegaly, low bone mineral density, and normal intelligence. Exome sequencing identified the same loss-of-function variant of SPIN4 (NM₀01012968. 3: c. 312₃13del: p. (Arg104Serfs*24) ), which was identified in the original family. The variant was present in the proband's mother and maternal grandmother. They both had skewed X-deviation (80% and 20%) and no height gain to their mid-parental heights. The first patient with the same SPIN4 variant described by Lui et al. had more pronounced birth weight and height compared to our patient, and an advanced bone age by one year. Both patients exhibited tall stature, normal pubertal timing, psychomotor development, and intellect, as well as similar facial features and organomegaly (Lui et al. , 2023).

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Cite This Study

Põlluaas et al. (2026) studied this question.

synapsesocial.com/papers/69a91d21d6127c7a504bfe90https://doi.org/10.1016/j.ejmg.2026.105073
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