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March 5, 2026Scientific Reports0 citationsOpen Access

A multiplex allele-specific polymerase chain reaction assay for rapid and affordable detection of APOL1 risk variants

OAOyindamola C. AdebayoKU LeuvenIBInge BongaersUniversitair Ziekenhuis LeuvenELElena LevtchenkoEmma Kinderziekenhuis

Key Points

  • The aim is to create an affordable and efficient method for detecting APOL1 risk variants associated with chronic kidney disease.
  • Developed a multiplex allele-specific polymerase chain reaction assay
  • Validated the assay against Sanger sequencing
  • Focused on low-resource settings for practical application
  • Achieved 96% concordance with Sanger sequencing
  • Demonstrated the ability to detect APOL1 G1 and G2 variants
  • Provided a reliable alternative to current costly genotyping methods

Abstract

Non-communicable diseases, such as chronic kidney disease (CKD), are becoming increasingly prevalent worldwide. Genetic factors, including apolipoprotein L1 (APOL1) risk variants (G1 and G2), have been identified as modifiers for the development and progression of CKD, particularly predisposing individuals of African descent to kidney disease. Identifying these risk variants is therefore crucial for enabling early preventative measures and effective disease monitoring. However, current clinical methods for APOL1 genotyping are costly and require advanced technical expertise and equipment, which are often unavailable in low-income countries. To address this gap, this study developed and validated a simple, cost-effective multiplex allele-specific polymerase chain reaction assay for detecting APOL1 risk variants. The assay demonstrated a 96% concordance with Sanger sequencing, confirming its reliability and diagnostic potential as a practical alternative for APOL1 genotyping in low-resource settings.

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Cite This Study

Adebayo et al. (2026) studied this question.

synapsesocial.com/papers/69a91d8dd6127c7a504c0763https://doi.org/10.1038/s41598-026-41971-9
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