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March 14, 2026Nature Methods3 citationsOpen Access

Isotonic and minimally invasive optical clearing media for live cell imaging ex vivo and in vivo

SIShigenori InagakiNNNao Nakagawa-TamagawaNHNathan Zechen Huynh

Key Points

  • The aim is to create non-toxic optical clearing media for effective fluorescence imaging of live tissues.
  • Developed SeeDB-Live, an optical clearing medium based on bovine serum albumin.
  • Tested the medium on live spheroids, organoids, acute brain slices, and in mouse brains in vivo.
  • Evaluated the effects on neuronal electrophysiological properties and sensory responses.
  • SeeDB-Live enables deep fluorescence imaging of live brain tissues without toxicity.
  • It minimally affects neuronal properties and sensory responses during imaging.
  • Successfully utilized for epifluorescence voltage imaging in various live preparations.

Abstract

Abstract Tissue clearing has been widely used for fluorescence imaging of fixed tissues, but its application to live tissues has been limited by toxicity. Here we develop minimally invasive optical clearing media for fluorescence imaging of live mammalian tissues. Light scattering is minimized by adding spherical polymers with low osmolarity to the extracellular medium. A clearing medium containing bovine serum albumin (SeeDB-Live) is compatible with live cells, enabling structural and functional imaging of live tissues, such as spheroids, organoids, acute brain slices and the mouse brains in vivo. SeeDB-Live minimally affects neuronal electrophysiological properties and sensory responses in vivo, and facilitates fluorescence imaging of deep cortical layers in live animals without detectable toxicity to neurons or behavior. We further demonstrate its utility to epifluorescence voltage imaging in acute brain slices and in vivo preparations. Thus, SeeDB-Live expands both the depth and modality range of fluorescence imaging in live mammalian tissues.

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Cite This Study

Inagaki et al. (2026) studied this question.

synapsesocial.com/papers/69b4fc0eb39f7826a300cb75https://doi.org/10.1038/s41592-026-03023-y
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