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March 16, 20260 citationsOpen Access

Explainable AI to predict a complex multifactorial outcome, childhood obesity: Application to clinical epidemiology

FCFuling; id_orcid 0000-0001-5553-8412 ChenInternational Centre for Radio Astronomy ResearchKVKevin VinsenThe University of Western AustraliaTMTrevor; id_orcid 0000-0002-5264-9229 MoriThe University of Western Australia

Key Points

  • This study aims to enhance the prediction of childhood obesity outcomes using an interpretable AI model.
  • Applied Kolmogorov-Arnold Networks for prediction
  • Analyzed data from the Raine Study Gen2 cohort
  • Used early-life epidemiological factors and polygenic risk scores for BMI prediction
  • Conducted feature importance analysis to identify key contributors
  • KAN achieved the highest R² score of 0.81 for BMI prediction
  • BMI z-score at Year 5 is a key predictor
  • Triceps and suprailiac skinfold thickness are significant contributors
  • Polygenic risk scores enhance predictive accuracy

Abstract

Abstract Childhood obesity is a complex and multi-factorial condition influenced by genetic predisposition, environmental exposures, and early-life anthropometrics. While machine learning (ML) models have shown promise in predicting obesity trajectories, their adoption in clinical settings is limited due to a lack of interpretability. In this study, we apply Kolmogorov-Arnold Networks (KAN), an explainable deep learning framework, to predict body mass index (BMI) as an obesity risk indicator at 8 years old, using early-life epidemiological factors and polygenic risk scores (PGS) from the Raine Study Gen2 cohort. KAN’s formularization mechanism enables mathematical representation of predictive relationships, allowing for improved model transparency. Our results demonstrate that KAN outperforms traditional ML models—including Extreme Random Forest, XGBoost, and Lasso regression—achieving the highest R2 score (0.81) when integrating polygenic scores and epidemiological data. Feature importance analysis identifies Body Mass Index (BMI) z-score at Year 5, triceps and suprailiac skinfold thickness, and polygenic scores as key contributors. These findings highlight the potential of explainable deep learning in personalized obesity prevention, providing a transparent and interpretable AI-driven tool for early intervention strategies.

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Cite This Study

Chen et al. (2025) studied this question.

synapsesocial.com/papers/69b79e538166e15b153ab737https://doi.org/10.1101/2025.06.21.25330041v1
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