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March 21, 2026Science7 citations

Resetting of a tandem microRNA156 enables vegetative perennial growth in rice

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BDBingxin DaiDLDanfeng LvECErwang Chen

Key Points

  • To uncover the genetic mechanisms responsible for perennial growth in rice through the analysis of introgression lines.
  • Identified the EBT1 locus in wild and cultivated rice using introgression lines.
  • Analyzed chromatin accessibility and histone modifications related to microRNA156 genes.
  • Generated recombinant lines by introgressing EBT1 and growth genes PROG1 and TIG1.
  • The wild rice allele EBT1 W1943 showed higher chromatin accessibility compared to the cultivated allele.
  • Lower levels of the repressive histone mark H3K27me3 were observed in the EBT1 W1943 allele.
  • Recombinant lines exhibited a robust perennial growth habit, paving the way for sustainable rice varieties.

Abstract

Annual cultivated rice was domesticated from perennial wild rice, yet the genetic mechanism of perennial growth habit remains unclear. Using introgression lines of wild and cultivated rice, we identified the Endless Branches and Tillers ( EBT1 ) locus, comprising tandem microRNA156 genes ( MIR156BC ). This locus is responsible for floral reversion and vegetative propagation contributing to perennial growth in wild rice. The wild rice allele EBT1 W1943 exhibits higher chromatin accessibility and lower levels of the repressive histone mark H3K27me3 to reset MIR156BC expression in tiller buds compared with the cultivated allele. Additionally, we introgressed EBT1 and prostrate growth genes PROG1 and TIG1 to generate recombinant lines exhibiting a robust perennial habit. Our findings pave the way for developing sustainable perennial rice cultivars in the future.

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Cite This Study

Dai et al. (2026) studied this question.

synapsesocial.com/papers/69be38216e48c4981c67854ahttps://doi.org/10.1126/science.adv2188
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