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March 25, 2026Proceedings of the National Academy of Sciences2 citationsOpen Access

Convergent evolution increases boron transport through SNPs and tandem duplications at BOR1 and BOR2 in Arabidopsis thaliana

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ETEmmanuel TergeminaCNCélia NetoMRMd Mamunur Rashid

Key Points

  • This research aims to understand the genetic factors that enhance boron accumulation in Arabidopsis thaliana populations that grow in volcanic soils.
  • Conducted genome-wide association studies (GWAS) to identify genetic variants related to boron accumulation.
  • Mapped genetic traits in a recombinant intercross population of Arabidopsis thaliana.
  • Analyzed tandem duplications at the BOR1 gene across different populations.
  • Identified multiple independent variants in BOR1 and BOR2 that increase boron accumulation in leaves.
  • Showed that convergent evolution led to similar phenotypic changes through diverse genetic pathways.
  • Demonstrated that combining GWAS with recombinant populations can effectively address allelic heterogeneity.

Abstract

Boron (B) is a crucial micronutrient, particularly in volcanic soils where its deficiency hampers agriculture. Here, we investigate the genetic basis of leaf B accumulation in natural populations of Arabidopsis thaliana that colonized volcanic islands in Cape Verde. Using a combination of genome-wide association studies (GWAS) and mapping in a recombinant intercross population, we identified a case of convergent phenotypic evolution in which multiple variants in the two principal B transporter genes, BOR1 and BOR2 , increase leaf B accumulation in parallel. These include multiple tandem duplications at BOR1 that arose independently in different populations. Overall, this study reveals a remarkable case of convergent evolution occurring within a relatively short time scale, where different types of de novo mutations at B efflux transporter genes achieve similar phenotypic outcomes. Further, our findings show that integrating recombinant populations with GWAS in natural populations can improve power to overcome allelic heterogeneity.

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Cite This Study

Tergemina et al. (2026) studied this question.

synapsesocial.com/papers/69c37bb3b34aaaeb1a67e5e6https://doi.org/10.1073/pnas.2525676123
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