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March 26, 2026Journal of the American Chemical Society3 citationsOpen Access

Cryo-Structural Insights into Enzymatic Peptide Self-Assembly Driving Extrinsic Lytic Cell Death

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MYMeihui YiJGJ. GuoAZAyisha Zia

Key Points

  • This research aims to explore how enzymatic peptide self-assembly can drive programmed cell death in cancer cells.
  • Designed phospho-biphenyl-capped peptide precursors for selective dephosphorylation by alkaline phosphatase (ALP).
  • Utilized cryo-electron microscopy (cryo-EM) to analyze peptide filament structures.
  • Employed cryo-electron tomography (cryo-ET) to observe filament interactions with plasma membranes in live cells.
  • Demonstrated that ALP-triggered peptide self-assembly forms membrane-rupturing filaments.
  • Filaments breach the plasma membrane and induce calcium influx and organelle dysfunction.
  • Identified a molecular mechanism linking enzymatic activity to cell death promotion.

Abstract

Programmed lytic cell death, including pyroptosis and necroptosis, involves intracellular enzymes that form membrane-rupturing pores. Tumor-associated ectoenzymes such as alkaline phosphatase (ALP), however, offer the potential to initiate lytic death extrinsically. Here, we design a phospho-biphenyl-capped peptide precursor that is selectively dephosphorylated by ALP on cancer cell surfaces, triggering enzyme-instructed peptide self-assembly (EISA) into in situ peptide filaments. These supramolecular filaments physically breach the plasma membrane, overwhelm ESCRT-dependent membrane repair, and induce catastrophic calcium influx, cytoskeletal collapse, and organelle dysfunction. While cryo-EM uncovers 2.5–2.9 Å resolution details of ordered dimeric packing that underlies their mechanical rigidity and membrane-rupturing capability, cryo-electron tomography (cryo-ET) reveals the filament penetration of the plasma membrane in live cells. By reprogramming ALP from an immune checkpoint ectoenzyme into a pro-death catalyst, this work establishes a molecular mechanism linking enzymatic catalysis to supramolecular order and membrane failure. More broadly, it outlines a supramolecular chemical–biology framework in which enzyme-triggered assemblies function as programmable executors of cell death.

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Cite This Study

Yi et al. (2026) studied this question.

synapsesocial.com/papers/69c4cddcfdc3bde44891a9fbhttps://doi.org/10.1021/jacs.5c23283
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