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March 28, 2026Biochemical Journal3 citationsOpen Access

Structural enzymology of a Fusarium graminearum aldehyde oxidase reveals a distinct active-site and reactivity versus its paralog galactose oxidase

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JFJessica K. FongLMLaura MazoANA.K. Nairn

Key Points

  • This study aims to analyze and compare the structural and functional characteristics of aldehyde oxidase and galactose oxidase from Fusarium graminearum.
  • Biochemical characterization of AA5_1 aldehyde oxidases from Fusarium graminearum and Colletotrichum graminicola.
  • Utilization of electron paramagnetic resonance to assess copper coordination geometry.
  • X-ray crystallography to determine the structure of the aldehyde oxidase.
  • Quantum mechanics/molecular mechanics calculations to study spin density distribution.
  • AA5_1 aldehyde oxidases exhibit predominant activities on aldehydes like methylglyoxal and d-glyceraldehyde enantioselectivity.
  • X-ray crystal structure revealed a unique orientation of a radical-stabilizing tryptophan compared to AA5_2 members.
  • QM/MM calculations showed that AA5_1 aldehyde oxidase does not delocalize spin density onto the second-sphere tryptophan.

Abstract

Copper radical oxidases (CROs), which comprise Auxiliary Activity Family 5 (AA5) in the Carbohydrate-Active Enzymes (CAZy) classification, have a long history of study due to their unique catalytic mechanism and biotechnological applications. The majority of mechanistic and structural insights into CRO function have been obtained from studies on the galactose 6-oxidase from the fungal phytopathogen Fusarium graminearum (FgrGalOx) of AA5 subfamily 2 (AA5₂). In contrast, enzyme structure/function studies of CROs from subfamily 1, comprising glyoxal oxidases, are limited. Here, we report the biochemical characterisation of the individual AA5₁ members from F. graminearum and Colletotrichum graminicola, which exhibit predominant activities on aldehydes, such as methylglyoxal, and enantioselectivity for d-glyceraldehyde. Electron paramagnetic resonance indicated that the AA5₁ aldehyde oxidases possessed similar copper coordination geometry to AA5₂ CROs, including a canonical cross-linked Tyr-Cys residue. However, the X-ray crystal structure of the F. graminearum aldehyde oxidase-the first of a fungal AA5₁ CRO-strikingly revealed that a key radical-stabilising tryptophan side chain in the second coordination sphere is provided by a different position in the polypeptide chain and exists in a flipped orientation vis-à-vis AA5₂ members. Quantum mechanics/molecular mechanics (QM/MM) calculations demonstrated that, in contrast to the AA5₂ GalOx, the AA5₁ aldehyde oxidase does not delocalise spin density onto the second-sphere tryptophan as a consequence of this alternative active-site arrangement. Together, these data provide new molecular insight into catalytic selectivity among the distinct subfamilies of alcohol- and aldehyde-specific CROs, which will facilitate elucidation of their biological roles and inform their application as biocatalysts.

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Cite This Study

Fong et al. (2026) studied this question.

synapsesocial.com/papers/69c770f78bbfbc51511e0e58https://doi.org/10.1042/bcj20260010
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