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March 29, 2026Remote Sensing2 citationsOpen Access

A Novel Urban Biological Parameter Estimation Method Based on LiDAR Point Cloud Single-Tree Segmentation

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TLTongtong LuFHFangYi HuangYDYuxin Ding

Key Points

  • To enhance the estimation of biological parameters for urban trees using a novel segmentation method and improved machine learning techniques.
  • Developed the CGF-CG single-tree segmentation method using geometric constraints and gravitational modeling.
  • Filtered trunk points by combining clustering and principal direction analysis.
  • Implemented canopy segmentation based on the identified trunk positions.
  • Applied an improved random forest method for estimating biological parameters including aboveground biomass and carbon storage.
  • Achieved over 98.5% average precision, recall, and F1-score in tree segmentation validation.
  • Reported mF1 score of 99.13%, surpassing existing methods.
  • IRF-BP estimation showed R2 of 0.81 with mean absolute percentage error of 7.5%, outperforming traditional models.

Abstract

Aiming at diverse urban tree structures and difficulties in vegetation point cloud extraction and utilization, this study proposed single-tree-scale biological parameter estimation methods for urban scenarios to enhance point cloud’s application value in urban greening management. For single-tree segmentation, it constructed a method based on the constraints of the trees’ geometric features and combined the gravitational modeling characteristics, called the CGF-CG single-tree segmentation method. This method (i) combines clustering and principal direction analysis to extract trunk points, (ii) introduces canopy segmentation based on trunk positions, (iii) optimizes edge point attributes via a gravitational model. Based on CGF-CG’s accurate results, an improved random forest method for single-tree biological parameter (IRF-BP) estimation (aboveground biomass, carbon storage, leaf area index, living vegetation volume) was proposed: (i) correlation analysis with variable screening, (ii) adaptive feature selection and pigeon-inspired optimization to enhance model generalization, (iii) adopting Shapley Additive Explanations (SHAP) to improve interpretability. Based on these, a complete model for different tree species was constructed. Validation showed that CGF-CG exhibited negligible over-segmentation and under-segmentation in the selected study areas, with overall average precision, recall, and F1-score over 98.5%. Additionally, on the selected overall region, the overall mF1 score, mPTP, and mPTR of our method are 99.13%, 99.15%, and 99.12%, respectively, which are superior to Forestmetrics, lidR, PyCrown, and DBSCAN methods. IRF-BP performed well, with a highest R2 of 0.81 and a lowest mean absolute percentage error of 7.5%, effectively surpassing the performance of traditional models such as RFR, GBR, KNN, and XGB. In summary, results provided theoretical and technical support for urban green resource management and evaluation.

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Cite This Study

Lu et al. (2026) studied this question.

synapsesocial.com/papers/69c8c371de0f0f753b39e4a9https://doi.org/10.3390/rs18071001
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