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April 10, 2026Mediators of Inflammation2 citationsOpen Access

Integrative Single‐Cell and Spatial Transcriptomics Reveals the Crosstalk of CTHRC1+ CAF and MMP7+ Epithelial Axis as a Potential Therapeutic Target and Predicts Poor Clinical Outcomes in Colorectal Cancer

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YYYang YangSHSong HuangHZHanyu Zhou

Key Points

  • This research aims to explore the heterogeneity and functional roles of cancer-associated fibroblasts (CAFs) in colorectal cancer (CRC).
  • Integrated single-cell RNA sequencing data from four public CRC datasets.
  • Utilized spatial transcriptomics to analyze the tumor microenvironment.
  • Applied Harmony, Monocle2, and CellChat algorithms for data analysis.
  • Identified distinct CAF subtypes and their interactions with epithelial cells.
  • Identified eight distinct CAF subtypes with unique gene expression profiles.
  • Found that CTHRC1+ CAFs are associated with T cell exclusion and high immune checkpoint gene expression.
  • Discovered a communication axis between CTHRC1+ CAFs and MMP7+ malignant epithelial cells via THBS2-SDC4 signaling.
  • Noted that high infiltration of both cell types correlates with worse prognosis and poor response to immunotherapy.

Abstract

Background Colorectal cancer (CRC) progression is heavily influenced by the tumor microenvironment (TME), where cancer‐associated fibroblasts (CAFs) are key players. However, the heterogeneity, plasticity, and functional roles of CAFs in CRC remain poorly understood. Methods We integrated single‐cell RNA sequencing (scRNA‐seq) data from four public CRC datasets and spatial transcriptomics data. Using computational approaches such as Harmony, Monocle2, and CellChat algorithms, we analyzed cellular landscapes, CAF subtype identification, developmental trajectories, transcription factor networks, and cell–cell communications to reveal CAF heterogeneity and their crosstalk with other cell subtypes in CRC. Results We identified eight distinct CAF subtypes with unique gene expression profiles and developmental plasticity. The CTHRC1+ CAF subtype was significantly associated with T cell exclusion and upregulated expression of immune checkpoint genes. We uncovered a specific communication axis between CTHRC1+ CAFs and MMP7+ malignant epithelial (Malig‐Epi) cells mediated by the thrombospondin (THBS)2‐SDC4 ligand–receptor signaling. High infiltration of both cell types synergistically correlates with worse prognosis and unfavorable response to immunotherapy. Conclusions Our study delineates CAF heterogeneity in CRC and highlights the CTHRC1+ CAF subtype as a critical organizer of an immunosuppressive niche. The THBS2‐SDC4 signaling pathway between CTHRC1+ CAFs and MMP7+ epithelial cells acts as a potential therapeutic target to disrupt protumorigenic crosstalk and improve clinical outcomes for CRC patients.

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Cite This Study

Yang et al. (2026) studied this question.

synapsesocial.com/papers/69d8962d6c1944d70ce076f6https://doi.org/10.1155/mi/9314553
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