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January 18, 2021Journal of the American Chemical Society224 citations

Molecular Identification of Tumor-Derived Extracellular Vesicles Using Thermophoresis-Mediated DNA Computation

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YLYike LiJDJinqi DengZHZiwei Han

Key Points

  • Develop a sensitive and accurate diagnostic platform utilizing thermophoresis-mediated DNA logic computation to detect and phenotype heterogeneous tumor-derived extracellular vesicles.
  • Engineered an aptamer-based DNA logic gate platform that targets multiple protein biomarkers on individual extracellular vesicles and uses thermophoretic accumulation to amplify signal readout.
  • Assessed diagnostic performance and molecular phenotyping concordance relative to standard tissue biopsy in a clinical cohort of breast cancer patients and healthy donors (n = 30).
  • The platform achieved a diagnostic accuracy of 97% in distinguishing breast cancer patients from healthy donors (n = 30).
  • Molecular phenotyping assessed from tumor-derived extracellular vesicles matched the clinical profiles obtained from tissue biopsies in breast cancer patients.

Abstract

Molecular profiling of tumor-derived extracellular vesicles (tEVs) holds great promise for non-invasive cancer diagnosis. However, sensitive and accurate identification of tEVs is challenged by the heterogeneity of EV phenotypes which reflect different cell origins. Here we present a DNA computation device mediated by thermophoresis for detection of tEVs. The strategy leverages the aptamer-based logic gate using multiple protein biomarkers on single EVs as the input and thermophoretic accumulation to amplify the output signals for highly sensitive and specific profiling of tEVs. Employing this platform, we demonstrate a high accuracy of 97% for discrimination of breast cancer (BC) patients and healthy donors in a clinical cohort (n = 30). Furthermore, molecular phenotyping assessed by tEVs is in concordance with the results from tissue biopsy in BC patients. The thermophoresis-mediated molecular computation on EVs thus provides new opportunities for accurate detection and classification of cancers.

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Cite This Study

Li et al. (2021) studied this question.

synapsesocial.com/papers/69dca9f1d4d0de07d11336b3https://doi.org/10.1021/jacs.0c12016
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