Isolation and Characterization of Nickel-Resistant Microbacterium algeriense C14 with Plant-Growth-Promoting Properties and Metal-Immobilization Capacity

Nickel (Ni) contamination threatens plant growth and ecosystem stability, and plant-growth-promoting rhizobacteria (PGPR) are sustainable bioremediation candidates. Here, we isolated and characterized a Ni-resistant PGPR strain, Microbacterium algeriense C14, from the rhizosphere of Zinnia elegans in Ni-contaminated soil. C14 exhibited exceptional Ni tolerance (up to 800 mg·L−1), produced indole-3-acetic acid (IAA), and maintained pH homeostasis (8.3–8.7). XPS and XRD analyses confirmed a novel carboxylate-based precipitation mechanism: C14 secretes carboxyl-containing metabolites that coordinate with Ni2+ to form stable amorphous nickel–carboxylate complexes. Under Ni stress (50–600 mg·L−1 for germination; 50–600 mg·kg−1 soil for pot experiments), C14 inoculation increased the seed germination index by up to 47.3%, seedling root length by 36.9%, and mature plant aboveground fresh weight by 21.32%, while reducing plant Ni uptake by 38.7% (seedlings) and 49.9% (mature shoots). It also enhanced plant antioxidant-enzyme (SOD and POD) activities and soluble protein content, improved soil quality (pH +0.16–0.33 units, urease/acid phosphatase activities elevated), and reduced soil-available Ni by 23.7%. Additionally, C14 enriched Proteobacteria in the rhizosphere and modified microbial community structure. These results highlight M. algeriense C14 as a promising resource for Ni-contaminated soil remediation via integrated metal immobilization, growth promotion, and rhizosphere regulation.