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Benchmarking reveals computational strategies for discovering non-reference HLA-presented peptides, ensuring reproducibility and transparency.
This dataset accompanies our study on benchmarking computational strategies for the discovery of non-reference HLA-presented peptides in immunopeptidomics. The primary goal of this repository is to ensure reproducibility and transparency by providing all data and code necessary to reproduce the key figures and analyses presented in the manuscript. In addition, the dataset includes detailed annotations to facilitate interpretation and reuse.
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Seunghyuk Choi (2026) studied this question.
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