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April 27, 2026npj Computational Materials0 citationsOpen Access

In context learning foundation models for materials property prediction with small datasets

QLQinyang LiRDRongzhi DongNMNicholas Miklaucic

Key Points

  • The aim is to create a unified framework for predicting materials properties using in-context learning techniques with small datasets.
  • Introduced a framework called ICL-FM integrating composition-based and structure-aware representations.
  • Utilized pretrained TabPFN transformer with GNN-derived embeddings and MagpieEX descriptors.
  • Conducted experiments on MatBench benchmark suite and standalone lattice thermal conductivity dataset.
  • ICL-FM outperformed state-of-the-art GNN models in five of six tasks, achieving a 9.93% improvement in phonon frequency prediction.
  • Successfully modeled complex phenomena like phonon-phonon scattering on the LTC dataset.
  • Demonstrated enhanced prediction accuracy through continuous representation refinement.

Abstract

Foundation models (FMs) have recently shown remarkable in-context learning (ICL) capabilities across diverse scientific domains. In this work, we introduce a unified in-context learning foundation model (ICL-FM) framework for materials property prediction that integrates both composition-based and structure-aware representations. The proposed approach couples the pretrained TabPFN transformer with graph neural network (GNN)-derived embeddings and our novel MagpieEX descriptors. MagpieEX augments traditional features with cation-anion interaction data to explicitly measure bond ionicity and charge-transfer asymmetry, capturing interatomic bonding characteristics that influence vibrational and thermal transport properties. Comprehensive experiments on the MatBench benchmark suite and a standalone lattice thermal conductivity (LTC) dataset demonstrate that ICL-FM achieves competitive or superior performance to state-of-the-art (SOTA) models with significantly reduced training costs. Remarkably, the training-free ICL-FM outperformed sophisticated SOTA GNN models in five out of six representative composition-based tasks, including a significant 9.93% improvement in phonon frequency prediction. On the LTC dataset, the FM effectively models complex phenomena such as phonon-phonon scattering and atomic mass contrast. t-SNE analysis reveals that the FM acts as a physics-aware feature refiner, transforming raw, disjoint feature clusters into continuous manifolds with gradual property transitions. This restructured latent space enhances interpolative prediction accuracy while aligning learned representations with underlying physical laws. This study establishes ICL-FM as a generalizable, data-efficient paradigm for materials informatics.

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Cite This Study

Li et al. (2026) studied this question.

synapsesocial.com/papers/69eefcf4fede9185760d3b5bhttps://doi.org/10.1038/s41524-026-02089-8
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