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May 2, 20260 citations

Genome-Wide In Silico Analysis of the Type VI Secretion System (T6SS) Within the Morganella Genus.

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MDMathilde DuqueAJAymeric JacqueminDGDelphine Girlich

Key Points

  • The aim is to investigate the distribution and diversity of the type VI secretion system (T6SS) in Morganella species.
  • Conducted a retrospective analysis of 293 Morganella genomes from 1966 to 2023.
  • Annotated T6SS clusters and subtypes using the SecReT6 platform and RAST.
  • Performed phylogenetic analysis on tssB genes and identified putative effectors and immunity proteins with BlastP and Alphafold.
  • M. sibonii isolates possess four distinct T6SS clusters, while most M. morganii isolates lack T6SS, with only one-third containing subtype i1.
  • M. morganii frequently contains the T6SS-predicted TseV effector in 95% of studied cases (117/123 effectors).
  • M. sibonii shows greater diversity in effector types compared to M. morganii.

Abstract

Morganella spp., part of the Morganellaceae family, are opportunistic pathogens commonly found in the human gut microbiota. They are highly adaptable, cause various types of infections, and are difficult to treat due to virulence factors and resistance genes. In 2017, Morganella became part of the WHO Bacterial Pathogen Priority List (BPPL). In 2024, a genomic study revealed significant differences between clinically relevant species, particularly between M. sibonii and M. morganii, with M. sibonii possessing a unique type VI secretion system (T6SS) operon. This study aimed to explore the distribution and diversity of T6SS in Morganella species. A retrospective analysis of 293 Morganella genomes from 1966 to 2023 was conducted. The T6SS clusters and subtypes were annotated using the SecReT6 platform and RAST, with phylogenetic analysis performed on tssB genes. Putative effectors and immunity proteins were identified through in silico analysis using BlastP and Alphafold. We identified that M. sibonii isolates possess four T6SS clusters of subtypes i1, i3 v.1, i3 v.2, and i5. In contrast, most M. morganii isolates lacked T6SS, with only one-third containing a subtype i1 T6SS. Notably, M. morganii frequently (95%, 117/123 effectors) harbored a T6SS-predicted TseV effector, while M. sibonii exhibited a greater diversity of effectors. This study highlights species-specific T6SS patterns among Morganella genus and suggests that T6SS might play a crucial role in bacterial lifestyle competition and host-pathogen interactions. It paves the way for future research on Morganella pathogenicity.

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Cite This Study

Duque et al. (2026) studied this question.

synapsesocial.com/papers/69f5945c71405d493afff2d9https://doi.org/10.1002/mbo3.70304
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