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May 4, 20261 citations

eIF4G2-mediated selective translation of chromatin regulators safeguards adult intestinal stem cell identity and differentiation.

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HKHaruko KunitomiAKAye Myat KhaineRJRadia Jamee

Key Points

  • This research aims to investigate how eIF4G2 affects the translation of chromatin regulators in intestinal stem cells and the implications for their identity and differentiation.
  • Transcriptomic and single-nucleus multiome analyses were performed to assess stem cell states.
  • Ribosome profiling was utilized to evaluate translation efficiency of chromatin regulators.
  • ATAC-seq was conducted to analyze chromatin accessibility and enhancer remodeling in intestinal stem cells.
  • Selective loss of translation efficiency in chromatin regulators, notably CREBBP and EP300, was observed, leading to decreased global histone acetylation.
  • Enhancements in YAP-TEAD-driven fetal loci activation were identified, while adult ISC elements were diminished.
  • Chemical inhibition of KAT3 mimicked the observed translational defects, underscoring the importance of translational buffering in adult identity maintenance.

Abstract

intestinal stem cell (ISC) and secretory maturation programs while preserving villus architecture. Transcriptomic and single-nucleus multiome analyses reveal a durable fetal-like/regenerative state with YAP-TEAD activation and regenerative absorptive cells. Ribosome profiling identifies selective translation-efficiency loss among chromatin regulators, especially the KAT3 coactivators CREBBP and EP300, resulting in reduced KAT3 abundance and global histone acetylation; chemical KAT3 inhibition phenocopies this state. CUT&Tag and assay for transposase-accessible chromatin sequencing (ATAC-seq) demonstrate that reduced eIF4G2-KAT3 output drives locus-selective enhancer remodeling, with loss of adult ISC/Wnt-Notch elements and activation of TEAD-enriched fetal loci, without inflammatory or integrated stress response programs driving the transition. Fetal intestinal spheroids remain viable despite similar biochemical defects, highlighting a stage-specific requirement for translational buffering in maintaining adult identity.

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Cite This Study

Kunitomi et al. (2026) studied this question.

synapsesocial.com/papers/69f836aa3ed186a739980e9fhttps://doi.org/10.1016/j.stem.2026.04.006
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