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May 13, 2026Nature Microbiology2 citationsOpen Access

Diverse paths to broadly neutralizing antibody escape among HIV-1 strains

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ASAlex C. StabellSLSonghee leeDPDebby J. Park

Key Points

  • Investigate the mutations leading to resistance against broadly neutralizing antibodies in HIV-1.
  • Developed a medium-to-high throughput approach for mutation identification.
  • Conducted 7,776 parallel selection experiments with primary HIV-1 isolates.
  • Analyzed genetic diversity across 15 HIV-1 strains for resistance patterns.
  • Substantial variability in resistance mutations observed among HIV-1 isolates.
  • Single amino acid changes raised bnAb IC 80 to over 10 μg ml −1 for 12 of 15 isolates.
  • Some resistance mutations conferred cross-resistance to other bnAbs targeting different epitopes.

Abstract

Abstract Broadly neutralizing antibodies (bnAbs) are promising agents for HIV-1 treatment and prevention. However, the genetic barriers and mutational pathways to viral resistance, which can limit therapeutic antibody utility, remain poorly defined. Here we developed a medium-to-high throughput approach to determine the mutations that confer resistance to neutralization by the bnAbs 3BNC117 and 10-1074 currently in clinical development. We performed 7,776 parallel selection experiments to identify bnAb resistance mutations in 15 primary isolates that span global HIV-1 genetic diversity. There was substantial variability among HIV-1 isolates in the identity of mutations that conferred bnAb resistance. For 12 of 15 HIV-1 isolates, single amino acid changes could increase bnAb IC 80 to >10 μg ml −1 . Some 3BNC117 resistance mutations conferred resistance to additional bnAbs targeting the same or different epitopes, and unconventional escape mechanisms were occasionally encountered. These data provide a rationale for selecting bnAb combinations that are most likely to achieve treatment success.

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Cite This Study

Stabell et al. (2026) studied this question.

synapsesocial.com/papers/6a03cbfc1c527af8f1ecfc20https://doi.org/10.1038/s41564-026-02347-x
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