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We describe an ontology for cell types that covers the prokaryotic, fungal, animal and plant worlds. It includes over 680 cell types. These cell types are classified under several generic categories and are organized as a directed acyclic graph. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases. The ontology is freely available at http://obo.sourceforge.net/ and can be viewed using standard ontology visualization tools such as OBO-Edit and COBrA.
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Jonathan Bard
University at Buffalo, State University of New York
Seung Y. Rhee
Carnegie Institution for Science
Michael Ashburner
University of Cambridge
Genome biology
University of Cambridge
University of Edinburgh
European Bioinformatics Institute
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Bard et al. (Fri,) studied this question.
synapsesocial.com/papers/6a0711d985d51e7cc7583d08 — DOI: https://doi.org/10.1186/gb-2005-6-2-r21