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May 17, 2026Journal of Medical Virology0 citations

A LAMP‐Assay for the Detection and Genotyping of HPV Causing Plantar Warts From Skin Scrapes Samples

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AAAlberto Aldana‐CaballeroServicio de Salud de Castilla La ManchaFTFélix Marcos TejedorServicio de Salud de Castilla La ManchaRMRaquel MayordomoUniversidad de Extremadura

Key Points

  • The study aims to compare a developed LAMP assay for HPV detection and genotyping against conventional PCR methods.
  • Developed a LAMP assay for HPV detection from skin scrapes without DNA purification.
  • Compared the LAMP assay's performance with conventional PCR regarding detection limits and agreement metrics.
  • Quantified viral loads using qPCR across different HPV genotypes.
  • LAMP showed a κ = 0.842 agreement with PCR for HPV detection.
  • Lower detection limit for LAMP was 2.46 × 10³ copies/µL vs. PCR's 1.51 × 10⁴ copies/µL.
  • LAMP effectively detected multi-genotype infections and yielded statistically significant differences in viral loads across HPV genotypes.

Abstract

ABSTRACT HPV diagnosis of plantar warts can be challenging to health professionals, while treatment outcomes depend on the HPV genotype. PCR based diagnostics are useful; however, LAMP may work better. In this study, we developed a LAMP assay and compared it to conventional PCR. Moreover, we tested its use on skin scrapes without DNA purification. Results showed a very good agreement between the LAMP assay and the PCR method (Kappa, κ = 0.842). The LAMP assay had a lower detection limit (C95: 2.46 × 10 3 copies/µL) compared to the PCR (C95: 1.51 × 10 4 copies/µL). Viral load measurement by qPCR revealed statistically significant differences across HPV genotypes. Many viral loads were at 10 3 copies/µL, below the detection limits of most standard HPV PCR methods. Skin scrapes could be used as target for the LAMP assay; however, optimization is required to improve the lower detection limit. The LAMP assay performed better at detecting and genotyping HPV than PCR and sequencing based methods. LAMP was able to resolve and detect multi‐genotype infections. Our results suggest that LAMP is useful for diagnosing HPV in plantar warts, by reducing costs, time and need of specialized equipment, thereby lending itself to use as a promising and rapid point‐of‐care testing in clinical practice.

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Cite This Study

Aldana‐Caballero et al. (2026) studied this question.

synapsesocial.com/papers/6a095c6d7880e6d24efe295bhttps://doi.org/10.1002/jmv.70975
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