CO₂‐concentrating mechanisms: a direct role for thylakoid lumen acidification?

A testable mechanism of CO 2 accumulation in photolithotrophs, originally suggested by Pronina & Semenenko, is quantitatively analysed. The mechanism involves (as does the most widely accepted hypothesis) the delivery of HCO 3 − to the compartment containing Rubisco. It differs in proposing subsequent HCO 3 − entry (by passive uniport) to the thylakoid lumen, followed by carbonic anhydrase activity in the lumen; uncatalysed conversion of HCO 3 − to CO 2 , even at the low pH of the lumen, is at least 300 times too slow to account for the rate of inorganic C acquisition. Carbonic anhydrase converts the HCO 3 − to CO 2 at the lower pH maintained in the illuminated thylakoid lumen by the light‐driven H + pump, generating CO 2 at 10 times or more the thylakoid HCO 3 − concentration. Efflux of this CO 2 can suppress Rubisco oxygenase activity and stimulate carboxylase activity in the stroma. This mechanism differs from the widely accepted hypotheses in the required location of carbonic anhydrase, i.e. in the thylakoid lumen rather than the stroma or pyrenoid, and in the need for HCO 3 − influx to thylakoids. The capacity for anion (assayed as Cl − ) entry by passive uniport reported for thylakoid membranes is adequate for the proposed mechanism; if the Cl − channel does not transport HCO 3 − , HCO 3 − entry could be by combination of the Cl − channel with a Cl − HCO 3 − antiporter. This mechanism is particularly appropriate for organisms which lack overt accumulation of total inorganic C in cells, but which nevertheless have the gas exchange characteristics of an organism with a CO 2 ‐concentrating mechanism.