Key result
Novel computational framework accurately estimates stochastic cardiac cell model parameters and variability from action potential traces.
Why the study?
Enhanced spatiotemporal ventricular repolarization variability is linked to ventricular arrhythmias and sudden cardiac death, but the underlying mechanisms remain elusive.
This novel computational methodology allows researchers to robustly characterize temporal and spatial variability in human ventricular repolarization mechanisms using limited experimental data.
Does not yet alter clinical arrhythmia management; leaves open validation of variability estimates in human cardiac models.
OBJECTIVE: Enhanced spatiotemporal ventricular repolarization variability has been associated with ventricular arrhythmias and sudden cardiac death, but the involved mechanisms remain elusive. In this paper, a methodology for estimation of parameters and state variables of stochastic human ventricular cell models from input voltage data is proposed for investigation of repolarization variability. METHODS: The proposed methodology formulates state-space representations based on developed stochastic cell models and uses the unscented Kalman filter to perform joint parameter and state estimation. Evaluation over synthetic and experimental data is presented. RESULTS: Results on synthetically generated data show the ability of the methodology to: first, filter out measurement noise from action potential (AP) traces; second, identify model parameters and state variables from each of those individual AP traces, thus allowing robust characterization of cell-to-cell variability; and, third, replicate statistical population's distributions of input AP-based markers, including dynamic markers quantifying beat-to-beat variability. Application onto experimental data demonstrates the ability of the methodology to match input AP traces while concomitantly inferring the characteristics of underlying stochastic cell models. CONCLUSION: A novel methodology is presented for estimation of parameters and hidden variables of stochastic cardiac computational models, with the advantage of providing a one-to-one match between each individual AP trace and a corresponding set of model characteristics. SIGNIFICANCE: The proposed methodology can greatly help in the characterization of temporal (beat-to-beat) and spatial (cell-to-cell) variability in human ventricular repolarization and in ascertaining the corresponding underlying mechanisms, particularly in scenarios with limited available experimental data.
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Sampedro-Puente et al. (2019) studied Cardiac Beat-to-Beat Variability. Unscented Kalman Filter-based joint estimation methodology was evaluated on Estimation of stochastic cell model parameters and state variables from input voltage data. The proposed methodology successfully estimated parameters and hidden variables of stochastic cardiac computational models from action potential traces, enabling robust characterization of cell-to-cell and beat-to-beat variability.
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