Key result
Enrichment analysis of GWAS studies identified 924 gene ontology terms and 130 KEGG pathways significantly associated with suicidal behaviors, including aldosterone synthesis and Rap1 signaling.
Why the study?
Multiple large-scale GWAS have identified genetic contributors to suicidal behaviors, motivating a summary and analysis of this data to explore biological process gene ontology and KEGG pathways.
What are the biological process gene ontologies and KEGG pathways implicated in genes associated with suicidal behaviors from GWAS studies?
Systematic Review
What are the biological process gene ontologies and KEGG pathways implicated in genes associated with suicidal behaviors from GWAS studies?
Enrichment analysis of GWAS studies identifies specific biological processes and KEGG pathways, including some cardiovascular-related pathways, implicated in suicidal behaviors.
Answers are grounded in this paper and cite their sources.
Highlights aldosterone-related pathways in suicidal behaviors; extends GWAS enrichment to cardio-psychiatric genetic overlaps for validation.
Multiple large-scale studies such as genome-wide association studies (GWAS) have been performed to identify genetic contributors to suicidal behaviors (SB). We aimed to summarize and analyze the information obtained in SB GWAS, to explore the biological process gene ontology (GO) of genes associated with SB from GWAS, and to determine the possible implications of the genes associated with SB in Kyoto encyclopedias of genes and genomes (KEGG) biological pathways. The articles included in the analysis were obtained from PubMed and Scopus databases. Enrichment analyses were performed in Enrichr to evaluate the KEGG pathways and GO of the genes associated with SB of GWAS. The findings of biological process GO analysis showed 924 GO involved in genes related with SB; of those, the regulation of glucose import in response to insulin stimulus, regulation of protein localization to plasma membrane, positive regulation of endopeptidase activity, heterotypic cell-cell adhesion, regulation of cardiac muscle cell contraction, positive regulation of protein localization to plasma membrane, and positive regulation of protein localization to cell periphery biological process GO showed significant statistical association. Furthermore, we obtained 130 KEGG pathways involved in genes related with SB, which Aldosterone synthesis and secretion, Rap1 signaling pathway and arrhythmogenic right ventricular cardiomyopathy pathways showed a significant statistical association. These findings give a better perspective of the biological participation of genes associated with SB, which will be important to perform adequate strategies to prevent and treat SB.
No takes yet. Share an insight, caveat, or question.
González‐Castro et al. (2019) conducted a systematic review in Suicidal behaviors. Genes associated with suicidal behaviors was evaluated on Gene ontology (GO) and KEGG biological pathways associated with suicidal behaviors. Enrichment analysis of GWAS studies identified 924 gene ontology terms and 130 KEGG pathways significantly associated with suicidal behaviors, including aldosterone synthesis and Rap1 signaling.
Synapse has enriched 10 related papers. Consider them for comparative context: