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June 10, 2026Cancer Discovery

A pan-cancer single-cell analysis of intratumoral copy number diversity and evolution

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Authors

HYHanghui YeTMThomas O. McDonaldREReem Elghaish

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Overview

Randomized trial evaluates intratumoral copy number alterations in multiple cancer types, indicating diverse evolution patterns.

Key Points

  • This analysis aims to investigate intratumoral heterogeneity and copy number alterations in various cancers at a single-cell level.
  • Conducted pan-cancer analysis of 94 human tumors from seven types: bladder, breast, colon, glioblastoma, kidney, lung, and ovarian.
  • Utilized single-cell copy number profiling for 62,646 aneuploid cells and bulk exome sequencing of most patients.
  • Performed single-nucleus RNA-seq on 6 samples for additional insights.
  • Found that increased subclonal diversity correlates with higher CNA burden, TP53 mutations, and geographic diversity.
  • Identified shared truncal CNAs across cancer cells from each patient, indicating evolution from a common ancestor.
  • Observed that tumors accumulated CNAs in bursts, highlighting the occurrence of punctuated evolution in diverse cancer types.

Cite This Study

Ye et al. (2026) studied this question.

synapsesocial.com/papers/6a28fe9f6f82f25be989bd56https://doi.org/10.1158/2159-8290.cd-25-0964
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