Abstract Background Plasmodium falciparum and Plasmodium vivax cause most malaria cases worldwide and are co-endemic in many countries, yet differ substantially in biology and in their responses to common interventions. As programmes drive down P. falciparum , P. vivax is a growing challenge for elimination, but most modelling tools assess the species separately, limiting coordinated policy. We aimed to build a unified malaria transmission modelling framework for co-endemic settings and assess how well it reflects global prevalence. Methods We integrated an established P. vivax model into a flexible P. falciparum modelling platform, enabling parallel simulation of both species within a shared biological, demographic, and intervention environment. Modelled equilibrium prevalences, matched by mosquito density, were compared with 19,225 yearly co-prevalence estimates from the Malaria Atlas Project (769 sub-national regions, 33 co-endemic countries, 2000–2024); uncertainty was represented by 95% quantile-based regions from 50 parameter draws. We assessed how this fit was modified by biological factors and simulated interventions. Results Here we show that the framework captures 51% of co-prevalence estimates within its uncertainty regions, rising to 65.5% when country-specific P. vivax relapse rates and human Duffy negativity are included. P. falciparum predominates where mosquito densities are high, whereas P. vivax is relatively more prevalent at lower densities. Simulated interventions produce larger relative reductions in P. falciparum prevalence, while P. vivax shows greater rebounds after intervention withdrawal, particularly at low mosquito densities. Conclusions This unified framework provides a quantitative tool to support coordinated, species-specific intervention strategies in co-endemic settings, a step toward sustainable malaria elimination.
Sheppard et al. (Tue,) studied this question.