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August 19, 2008Bioinformatics293 citationsOpen Access

A toolkit for analysing large-scale plant small RNA datasets

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SMSimon MoxonFSFrank SchwachTDTamás Dalmay

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Abstract

UNLABELLED: Recent developments in high-throughput sequencing technologies have generated considerable demand for tools to analyse large datasets of small RNA sequences. Here, we describe a suite of web-based tools for processing plant small RNA datasets. Our tools can be used to identify micro RNAs and their targets, compare expression levels in sRNA loci, and find putative trans-acting siRNA loci. AVAILABILITY: The tools are freely available for use at http://srna-tools.cmp.uea.ac.uk.

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Moxon et al. (2008) studied this question.

synapsesocial.com/papers/6a650acddfe9f9fc9bef406fhttps://doi.org/10.1093/bioinformatics/btn428
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