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February 8, 2008Clinical ChemistryOpen Access

Array-Based Resequencing Assay for Mutations Causing Hypertrophic Cardiomyopathy

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Why the study?

Does an array-based resequencing assay accurately detect mutations in HCM-associated genes compared to conventional capillary sequencing?

Population

24 reference samples for hypertrophic cardiomyopathy (HCM) genetic testing

Comparison

Array-based resequencing assay covering MYH7… vs Conventional capillary sequencing

Design

Other

Key result

An array-based resequencing assay detected the underlying point mutation in 23 of 24 reference samples, demonstrating ≥99.9% comparability to conventional capillary sequencing.

Authors

SWStephan WaldmüllerMMMelanie MüllerKRKirsten Rackebrandt

Discussion

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Member takes

Overview

Warrants no change in HCM genetic testing protocols; leaves open utility of array-based resequencing pending larger validation.

Structured PICO

Does an array-based resequencing assay accurately detect mutations in HCM-associated genes compared to conventional capillary sequencing?

P
Population
24 reference samples used to validate an array-based resequencing assay for hypertrophic cardiomyopathy.
I
Intervention
Array-based resequencing (ABR) assay covering MYH7, MYBPC3, and TNNT2
C
Comparator
Conventional capillary sequencing
O
Outcome
Detection of underlying point mutations and comparability to conventional capillary sequencingsurrogate

Main Result

Effect estimate: ≥99.9% comparability

An array-based resequencing assay provides a highly accurate and potentially more efficient alternative to conventional capillary sequencing for genetic testing in hypertrophic cardiomyopathy.

Cite This Study

Waldmüller et al. (2008) studied Hypertrophic cardiomyopathy (n=24). Array-based resequencing (ABR) assay vs. Conventional capillary sequencing was evaluated on Detection of underlying point mutations and comparability to conventional capillary sequencing (≥99.9% comparability). An array-based resequencing assay detected the underlying point mutation in 23 of 24 reference samples, demonstrating ≥99.9% comparability to conventional capillary sequencing.

synapsesocial.com/papers/6a71c5e131a3df824329cde4https://doi.org/10.1373/clinchem.2007.099119
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Also Consider

Synapse has enriched 4 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Low-density DNA microarrays are versatile tools to screen for known mutations in hypertrophic cardiomyopathy2002 · 36 citations
  2. 2Denaturing high performance liquid chromatography: high throughput mutation screening in familial hypertrophic cardiomyopathy and SNP genotyping in motor neurone disease2005 · 31 citations
  3. 3Genetics of hypertrophic cardiomyopathy: one, two, or more diseases?2007 · 85 citations
  4. 4Tracking the Evolution of the SARS Coronavirus Using High-Throughput, High-Density Resequencing Arrays2004 · 139 citations