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February 18, 2025Nature Genetics57 citationsOpen Access

Large-scale genome-wide association analyses identify novel genetic loci and mechanisms in hypertrophic cardiomyopathy

RTRafik TadrosElectrophysiologySZSean L. ZhengHeart Failure & TransplantCGChristopher GraceJohn Radcliffe Hospital

Key Result

Rare truncating variants in the SVIL gene confer a roughly tenfold increased risk of hypertrophic cardiomyopathy (OR 10.5).

Study Design

Type

Meta-Analysis (n=74,259)

Multicenter

Yes

Structured PICO

P
Population
74,259 individuals (5,900 cases and 68,359 controls) included in a genome-wide association study meta-analysis to identify genetic loci associated with hypertrophic cardiomyopathy.
O
Outcome
Genetic loci associated with hypertrophic cardiomyopathy and left ventricular traits

This large-scale genomic analysis identified 70 loci associated with HCM, established SVIL as a novel disease gene, and provided Mendelian randomization evidence that increased LV contractility is causally linked to both obstructive and nonobstructive HCM.

Main Result

Odds Ratio: 10.5 (95% CI 4.3–26.1)

p-value: p=3.6x10^-7

Limitations

  • Significant heterogeneity in the exposure-outcome effects in Mendelian randomization analyses
  • Potential violations of Mendelian randomization assumptions
  • Significant heterogeneity in the exposure-outcome effects

Abstract

Hypertrophic cardiomyopathy (HCM) is an important cause of morbidity and mortality with both monogenic and polygenic components. Here, we report results from a large genome-wide association study and multitrait analysis including 5,900 HCM cases, 68,359 controls and 36,083 UK Biobank participants with cardiac magnetic resonance imaging. We identified 70 loci (50 novel) associated with HCM and 62 loci (20 novel) associated with relevant left ventricular traits. Among the prioritized genes in the HCM loci, we identify a novel HCM disease gene, SVIL, which encodes the actin-binding protein supervillin, showing that rare truncating SVIL variants confer a roughly tenfold increased risk of HCM. Mendelian randomization analyses support a causal role of increased left ventricular contractility in both obstructive and nonobstructive forms of HCM, suggesting common disease mechanisms and anticipating shared response to therapy. Taken together, these findings increase our understanding of the genetic basis of HCM, with potential implications for disease management.

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Cite This Study

Tadros et al. (2025) conducted a meta-analysis in Hypertrophic cardiomyopathy (n=74,259). Rare loss-of-function SVIL variants vs. Non-carriers / Controls was evaluated on Risk of hypertrophic cardiomyopathy (OR 10.5, 95% CI 4.3-26.1, p=3.6x10^-7). Rare truncating variants in the SVIL gene confer a roughly tenfold increased risk of hypertrophic cardiomyopathy (OR 10.5).

synapsesocial.com/papers/6a94fc17c05e7b5813b2cba5https://doi.org/10.1038/s41588-025-02087-4
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