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September 2, 2026Biotechnology and BioengineeringOpen Access

Model‐Driven Monitoring and Parameter‐Based Development of an Escherichia coli Fed‐Batch Process for Production of a Fab Antibody Fragment Across Scales

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Authors

FSFabian Schröder-KleebergLKLucas KaspersetzMZMarkus Zoellkau

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Overview

Bioprocess modeling study reveals feeding-induced physiological shifts in Escherichia coli, highlighting critical parameters for multi-scale bioreactor scale-down.

Key Points

  • To evaluate the feasibility and predictive accuracy of mechanistic model-driven scale-down across five bioreactor sizes for an Escherichia coli process producing Fab antibody fragments.
  • Cultivated an Escherichia coli fed-batch process across five bioreactor scales ranging from 15 mL mini-bioreactors to a 30 L pilot scale.
  • Extended a macro-kinetic model of aerobic growth and overflow metabolism with equations describing product synthesis and extracellular release to monitor cross-scale physiology.
  • Compared continuous feeding modes to pulse-based feeding and tested varying IPTG concentrations to maintain a constant IPTG-to-biomass ratio at the milliliter scale.
  • Batch-phase growth parameters aligned consistently across all five scales, confirming baseline feasibility of scaling down from 30 L to 15 mL vessels.
  • Pulse-based feeding required in 15 mL and 150 mL vessels prevented complete alignment with continuous-fed reference scales by reducing cell lysis and increasing productivity.
  • Reducing IPTG concentrations to match biomass ratios at the milliliter scale doubled the specific product yield and prolonged Fab fragment formation.

Cite This Study

Schröder-Kleeberg et al. (2026) studied this question.

synapsesocial.com/papers/6a97e20ec562ede874ec60cbhttps://doi.org/10.1002/bit.70326
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