Genomic surveillance study demonstrates the utility of phylodynamics for tracking multidrug-resistant Shigella sonnei, highlighting enhanced local public health outbreak response.
We report the detection of a Shigella sonnei outbreak from a small investigation in the San Francisco Bay area, California, USA, in 2024. By combining outbreak investigation with genomic sequencing, we show the utility of phylodynamics to aid outbreak investigations of bacterial pathogens by state or local public health departments.
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Lloyd et al. (2025) studied this question.
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