The collisional activation mass spectra of the [M – H]− ions of dipeptides containing Met or Cys show the usual backbone fragmentation allowing the sequence of the peptide to be determined. A methionine residue may be identified by the presence of a pronounced peak resulting from loss of MeSH, while a cysteine residue may be identified by the presence of a peak corresponding to loss of either H2S or (H2S + CO2).
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Waugh et al. (1993) studied this question.
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