Trimethyl- p -benzoquinone (TMQ) has been proposed to furnish an accurate thermochemical model for plastoquinones, key electron acceptors in oxygenic photosynthetic electron transfer. Free energy perturbation/molecular dynamics simulations combined with hybrid Hartree−Fock/density functional (HF/DF) calculations confirm that TMQ and plastoquinone-1 have approximately equal aqueous one-electron reduction potentials, within the accuracy of the calculations. HF/DF calculations using the B3LYP/6-31G(d) method also show that TMQ and its radical anion have (1) structures almost identical to those of PQ a model for plastoquinone-1 without the isoprenoid chain's methyl groups and its radical anion, respectively, have (2) spin densities for TMQ •- and PQ •- which differ by 0.01 electrons at most, and have (3) key C O and C C stretching frequencies for the TMQ/PQ and TMQ •- /PQ •- pairs differing by only 1−8 cm -1 . Thus, TMQ and TMQ •- are excellent models for the structures, spin densities, and vibrational frequencies of plastoquinones and their radical anions, respectively.
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Wise et al. (1997) studied this question.
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